Raspbian で基本ソフトウエア類のインストール

Git, git-hub (GitHub), CMake, cmake-gui, ImageMagick (画像), FFMpeg (ビデオデータ処理), p7zip (圧縮, 展開), Graphviz (グラフデータ構造可視化), net-tools, hwinfo (ハードウエア情報), gdal (地理情報), tesseract, jq (JSON整形), jsonlint　(JSONチェッカ)

sudo apt -yV install git
sudo apt -yV install git-hub
sudo apt -yV install cmake
sudo apt -yV install cmake-curses-gui
sudo apt -yV install cmake-gui
sudo apt -yV install imagemagick
sudo apt -yV install ffmpeg
sudo apt -yV install p7zip-full
sudo apt -yV install graphviz graphviz-dev
sudo apt -yV install net-tools
sudo apt -yV install hwinfo
sudo apt -yV install gdal-bin libgdal-dev
sudo apt -yV install tesseract-ocr tesseract-ocr-jpn libtesseract-dev libleptonica-dev tesseract-ocr-jpn
sudo apt -yV install jq
sudo apt -yV install jsonlint

アクセサリ

xpdf (PDF リーダ), shutter (画面キャプチャ), catfish (ファイル検索)

sudo apt -yV install xpdf
sudo apt -yV install shutter
sudo apt -yV install libgoo-canvas-perl
sudo apt -yV install catfish

インターネット

FileZilla (ファイル転送), firefox (Webブラウザ), Wireshark (ネットワーク), netcat (通信), AWS Command Line Interface (AWS)

sudo apt -yV install filezilla
sudo apt -yV install firefox-esr
sudo apt -yV install firefox-esr-l10n-ja
sudo apt -yV install wireshark
sudo apt -yV install netcat
sudo apt -yV install awscli aws-shell

エディタ

# emacs
sudo apt -yV install emacs
# leafpad
sudo apt -yV install leafpad
# gedit 
sudo apt -yV install gedit gedit-plugins 
sudo apt -yV install gedit-developer-plugins

グラフィックス

Blender (3次元), POV-ray, MeshLab, MakeHuman, Inkscape, GIMP, pinta, CloudCompare

sudo apt -yV install blender
sudo apt -yV install povray povray-examples
sudo apt -yV install meshlab
sudo apt -yV install makehuman
sudo apt -yV install inkscape
sudo apt -yV install gimp
sudo apt -yV install pinta
# CloudCompare
sudo apt -yV install qtbase5-dev qtdeclarative5-dev qt5-default qttools5-dev libqt5widgets5 libqwt-qt5-dev libqt5svg5-dev
cd /tmp
wget https://github.com/CloudCompare/CloudCompare/archive/master.zip
unzip master.zip
rm -f master.zip
cd CloudCompare-master
rm -rf build
mkdir build
cd build
cmake ..
cmake --build .
sudo make install

地図情報

sudo apt -yV install qgis

ビデオ

sudo apt -yV install vlc
sudo apt -yV install openshot

データベース

sudo apt -yV install sqlite3
sudo apt -yV install sqlitebrowser
sudo apt -yV install redis-server redis-tools
#  sqliteman
sudo apt -yV install libqscintilla2-dev
cd /tmp
wget https://sourceforge.net/projects/sqliteman/files/sqliteman/1.2.2/sqliteman-1.2.2.tar.bz2 
tar -xvjof sqliteman-1.2.2.tar.bz2 
cd sqliteman-1.2.2
rm -rf build
mkdir build
cd build
cmake ..
cmake --build .
sudo make install

ライブラリ

OpenCV (コンピュータビジョン), CUDA, OpenALPR, OpenNI2, libPCL, Guava, Dlib

#
sudo apt -yV install nvidia-cuda-dev nvidia-cuda-doc nvidia-cuda-gdb
# sudo apt -yV install nvidia-cuda-toolkit
sudo apt -yV install openalpr openalpr-utils libopenalpr-dev
sudo apt -yV install openni2-utils libopenni2-dev
sudo apt -yV install libpcl-dev
sudo apt -yV install libguava-java
#
echo "CONF_SWAPSIZE=1024" | sudo tee -a /etc/dphys-swapfile
sudo /etc/init.d/dphys-swapfile stop
sudo /etc/init.d/dphys-swapfile start
#
source /usr/local/bin/virtualenv-wrapper.sh
workon py35
pip install numpy
cd /tmp
rm -rf opencv
rm -rf opencv_contrib
git clone https://github.com/opencv/opencv.git
git clone https://github.com/opencv/opencv_contrib.git
sudo apt install python-dev python3-dev 
cd opencv
rm -rf build
mkdir build
cd build
cmake -D CMAKE_BUILD_TYPE=RELEASE \
      -D CMAKE_INSTALL_PREFIX=/usr/local \
      -D INSTALL_PYTHON_EXAMPLES=ON \
      -D OPENCV_EXTRA_MODULES_PATH=/tmp/opencv_contrib/modules \
      -D BUILD_opencv_python2=OFF \
      -D BUILD_opencv_python3=ON \
      -D PYTHON_DEFAULT_EXECUTABLE=python3 \
      -D BUILD_EXAMPLES=ON ..
make
sudo make install
sudo /sbin/ldconfig
ipython << EOS
import cv2
print(cv2.__version__)
EOS
rm -f ~/.virtualenvs/cv/lib/python3.6/site-packages/cv2.so 
ln -s /usr/local/lib/python3.6/site-packages/cv2-36m.so ~/.virtualenvs/cv/lib/python3.6/site-packages/cv2.so 
#
fgrep -v "CONF_SWAPSIZE" /etc/dphys-swapfile > /tmp/1
sudo cp /etc/dphys-swapfile /etc/dphys-swapfile.$$
sudo cp /tmp/1 /etc/dphys-swapfile
sudo /etc/init.d/dphys-swapfile stop
sudo /etc/init.d/dphys-swapfile start

source /usr/local/bin/virtualenv-wrapper.sh
workon py35
cd /tmp
wget http://dlib.net/files/dlib-19.15.zip
unzip dlib-19.15.zip
cd dlib-19.15
rm -rf build
mkdir build
cd build
cmake .. 
cmake --build .
sudo make install

設計

sudo apt -yV install freecad

ゲームフレームワーク，ゲームエンジン

# Panda3d
cd /tmp
sudo rm -f master.zip
wget https://github.com/panda3d/panda3d/archive/master.zip
unzip master.zip
rm -f master.zip
cd panda3d-master
sudo python makepanda/makepanda.py --everything --installer --no-egl --no-gles --no-gles2 --no-opencv
sudo dpkg -i panda3d*.deb
# pip install --pre --extra-index-url https://archive.panda3d.org/ panda3d

Docker類

sudo apt -yV install docker
sudo apt -yV install docker-compose

Rのパッケージを追加

cd /tmp
sudo apt -yV install libxml2-dev libfftw3-dev libfreetype6-dev
sudo apt -yV install libnlopt-dev
echo 'options(repos="http://cran.rstudio.com"); update.packages(checkBuilt=TRUE, ask=FALSE)' | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
cat /tmp/a.$$.r | sudo R --vanilla 
# EBImage
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r 
echo 'biocLite("EBImage") ' >> /tmp/a.$$.r 
cat /tmp/a.$$.r | sudo R --vanilla 
# dplyr
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("dplyr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# qvalue
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r 
echo 'biocLite("qvalue") ' >> /tmp/a.$$.r 
cat /tmp/a.$$.r | sudo R --vanilla 
# pam
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("pam", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# pca3d
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("pca3d", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# tm 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("tm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# mmand
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("mmand", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# devtools
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("devtools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# ctv
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("ctv", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# osmar
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("osmar", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# pi0
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("pi0", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# leaps
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("leaps", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# ifs 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("ifa", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# BMA
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("BMA", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# WriteXLS
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("WriteXLS", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# CHsharp
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("CHsharp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# brew
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("brew", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# data.table
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("data.table", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# pcaPP
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("pcaPP", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# fastICA
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("fastICA", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# zoo
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("zoo", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# base
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("abind", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("boot", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("car", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("chron", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("cluster", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("codetools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("colorspace", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("effects", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("foreign", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("lattice", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("lmtest", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("mgcv", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("multcomp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("mvtnorm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("relimp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("rpart", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("sandwich", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("sm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("spatial", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("strucchange", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("survival", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# additional 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("catspec", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("cluster", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("deldir", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("diagram", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("fields", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("fftw", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("gregmisc", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("igraph", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("nlme", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("nnclust", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("png", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("pixmap", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("pvclust", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("rgl", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("scatterplot3d", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("som", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Hmisc", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Rcmdr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("RcmdrPlugin.KMggplot2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("RSQLite", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("CCA", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("KernSmooth", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("MASS", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Matrix", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Rcmdr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# more
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("ggplot2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("xlsxjars", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("xlsx", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("shiny", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("chron", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("sqldf", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("plyr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("entropy", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("moments", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("spatstat", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("png", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("biOps", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("biOpsGUI", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("maptools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("caTools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
# echo 'install.packages("class", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
# cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("evd", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("its", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("mapproj", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("mnormt", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("sm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("sp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("stabledist", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("timeSeries", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("tseries", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("bayesm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("gdata", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("gmodels", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("rpart", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Zelig", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("forecast", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# again 
echo 'options(repos="http://cran.rstudio.com")' > /tmp/a.$$.r 
echo 'update.packages(checkBuilt=TRUE, ask=FALSE, repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r 
echo 'biocLite("osmar") ' >> /tmp/a.$$.r 
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r 
echo 'biocLite("Rgraphviz") ' >> /tmp/a.$$.r 
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r 
echo 'biocLite("hypergraph") ' >> /tmp/a.$$.r 
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r 
echo 'biocLite("RBGL") ' >> /tmp/a.$$.r 
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r 
echo 'biocLite("GraphPart") ' >> /tmp/a.$$.r 
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("XML", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("gridExtra", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("gridSVG", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("png", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("jpeg", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("igraph", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Rcpp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("RcppExamples", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("mvoutlier", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("randomForest", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("plyr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("reshape2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("forecast", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("stringr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("lubridate", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("sqldf", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("ggplot2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("party", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("gdm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("survival", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("caTools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Epi", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("vcd", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Rz", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("parallel", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("compiler", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Imap", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("changepoint", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("gstat", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("sp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("rgeos", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("maptools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("shapefiles", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("spsurvey", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("sp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("RColorBrewer", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("forecast", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("psych", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("xts", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("timeSeries", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("gregmisc", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("mclust", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("topmodel", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("insol", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("rJava", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("RWekajars", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("RWeka", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("Snowball", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("lsa", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r 
echo 'install.packages("stringdist", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# again 
echo 'options(repos="http://cran.rstudio.com")' > /tmp/a.$$.r 
echo 'update.packages(checkBuilt=TRUE, ask=FALSE, repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla 
# again and again
echo 'options(repos="http://cran.rstudio.com")' > /tmp/a.$$.r 
echo 'update.packages(checkBuilt=TRUE, ask=FALSE, repos="http://cran.rstudio.com/") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla

Raspbian で基本ソフトウエア類のインストール

Raspbian での留意事項

前準備

ここでインストールする基本ソフトウエア

基本ソフトウエアのインストール手順

ソースコードからのビルドに有用なソフトウエアのインストール

Raspbian での環境整備

プログラミング，開発環境

ツール